When Chromosome 15 Duplicates: A Clinical-Genetic Challenge
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DOI:
https://doi.org/10.37980/im.journal.ggcl.en.20252717Keywords:
Dup15q syndrome, Chromosome 15q11-q13, Array-CGH, Autism spectrum disorder, EpilepsyAbstract
Background: Chromosome 15q11–q13 duplication syndrome (Dup15q) is a rare neurodevelopmental disorder caused by additional copies of a genomic region enriched in imprinted genes essential for normal neuronal function. It is commonly associated with autism spectrum disorder (ASD), epilepsy, hypotonia, global developmental delay, and intellectual disability. Case presentation: We report the case of a 31-year-old male with a longstanding history of refractory epilepsy, autism spectrum disorder, and intellectual disability. Genetic evaluation using array-comparative genomic hybridization (array-CGH) combined with single-nucleotide polymorphism (SNP) analysis identified a de novo interstitial heterozygous duplication of 10.03 Mb involving the 15q11.2–q13.3 region. The duplicated segment encompasses multiple genes with key roles in neurodevelopment, including UBE3A, GABRB3, GABRA5, SNRPN, and NDN. Parental testing by multiplex ligation-dependent probe amplification (MLPA) was negative, confirming a non-inherited origin. Establishing the molecular diagnosis allowed precise clinical classification, informed therapeutic decision-making, and enabled appropriate genetic counseling. Conclusion: This case illustrates the diagnostic value of array-CGH in patients with complex neurodevelopmental phenotypes and emphasizes the importance of early genetic assessment in individuals presenting with ASD and epilepsy. Identification of pathogenic copy number variants such as Dup15q has significant implications for prognosis, clinical management, and family counseling.
References
[1] Bisba M, Malamaki C, Constantoulakis P, Vittas S. Chromosome 15q11-q13 Duplication Syndrome: A Review of the Literature and 14 New Cases. Genes (Basel). 2024 Oct 1;15(10).
[2] Elamin M, Lemtiri-Chlieh F, Robinson TM, Levine ES. Dysfunctional sodium channel kinetics as a novel epilepsy mechanism in chromosome 15q11-q13 duplication syndrome. Epilepsia. 2023 Sep 1;64(9):2515–27.
[3] Piard J, Philippe C, Marvier M, Beneteau C, Roth V, Valduga M, et al. Clinical and molecular characterization of a large family with an interstitial 15q11q13 duplication. Am J Med Genet A. 2010 Aug;152(8):1933–41.
[4] Shehi E, Shah H, Singh A, Pampana VS, Kaur G. The Linkage Between Autism Spectrum Disorder and Dup15q Syndrome: A Case Report. Cureus. 2022 Apr 17;
[5] Urraca N, Cleary J, Brewer V, Pivnick EK, Mcvicar K, Thibert RL, et al. The interstitial duplication 15q11.2-q13 syndrome includes autism, mild facial anomalies and a characteristic EEG signature. Autism Research. 2013 Aug;6(4):268–79.
[6] Manickam K, McClain MR, Demmer LA, Biswas S, Kearney HM, Malinowski J, et al. Exome and genome sequencing for pediatric patients with congenital anomalies or intellectual disability: an evidence-based clinical guideline of the American College of Medical Genetics and Genomics (ACMG). Genetics in Medicine. 2021 Nov 1;23(11):2029–37.
[7] Miller DT, Adam MP, Aradhya S, Biesecker LG, Brothman AR, Carter NP, et al. Consensus Statement: Chromosomal Microarray Is a First-Tier Clinical Diagnostic Test for Individuals with Developmental Disabilities or Congenital Anomalies. Am J Hum Genet. 2010 May 14;86(5):749–64.
[8] Cucinotta F, Lintas C, Tomaiuolo P, Baccarin M, Picinelli C, Castronovo P, et al. Diagnostic yield and clinical impact of chromosomal microarray analysis in autism spectrum disorder. Mol Genet Genomic Med. 2023 Aug 1;11(8).
[9] Gürkan H, Atli Eİ, Atli E, Bozatli L, Araz Altay M, Yalçintepe S, et al. Chromosomal microarray analysis in Turkish patients with unexplained developmental delay and intellectual developmental disorders. Noropsikiyatri Arsivi. 2020;57(3):177–91.
[10] Jang W, Kim Y, Han E, Park J, Chae H, Kwon A, et al. Chromosomal microarray analysis as a first-tier clinical diagnostic test in patients with developmental delay/intellectual disability, autism spectrum disorders, and multiple congenital anomalies: A prospective multicenter study in korea. Ann Lab Med. 2019;39(3):299–310.
[11] Aldosari AN, Aldosari TS. Comprehensive evaluation of the child with global developmental delays or intellectual disability. Vol. 67, Clinical and Experimental Pediatrics. Korean Pediatric Society; 2024. p. 435–46.
[12] Ma Y, Yang R, Yan X, Song X, Zhan F. Genetic analysis and prenatal diagnosis of 15q11-q13 microduplication syndrome. Journal of Maternal-Fetal and Neonatal Medicine. 2025;38(1).
[13] Jeste S, DiStefano C. Can Preclinical Insights Give Us Hope for Effective Treatments for Epilepsy in 15q11-q13 Duplication Syndrome? Vol. 90, Biological Psychiatry. Elsevier Inc.; 2021. p. 735–7.
[14] Mim RA, Soorajkumar A, Kosaji N, Rahman MM, Sarker S, Karuvantevida N, et al. Expanding deep phenotypic spectrum associated with atypical pathogenic structural variations overlapping 15q11–q13 imprinting region. Brain Behav. 2024 Apr 1;14(4).
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